Job Description P39263 Confidence 4.51% Date Thu Jan 5 11:58:35 GMT 2012 Rank 30 Aligned Residues 180 % Identity 13% Template d1xmea1 SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 2.30

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		M	F	M	L	V	I	G	G	A	F	G	I	V	M	R	T	G	T	I	D	N	G	I	L	A	L	I	R	H	T	R	G	N	E	I	L	F	I	P	A	L	F	I	L	F	S	L	G	G	A	V	F	G	M	G	E	E	A	V	A	F	A	I	I	I	A	P	L	M	V	R	L	G	Y	D	S	I	.	.	T
Query Conservation																																																																															.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	G	F	I	P	G	G	A	G	G	I	V	N	A	S	F	T	L	D	Y	V	V	H	N	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	P	G	H	F	H	L	Q	V	A	S	L	V	T	L	T	A	M	G	S	L	Y	W	L	L	P	N	L	T	G	K	P	I	S	D	A	Q	R	R
Template Known Secondary structure																T	S	G	G	G					T	T	B	T	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T									T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.														380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	L	V	T	Y	I	A	T	Q	I	G	F	A	S	S	W	M	N	P	F	C	V	V	V	A	Q	G	I	A	G	.	.	.	.	.	.	.	.	.	.	V	P	V	L	S	G	S	G	L	R	I	V	V	W	V	I	A	T	L	I	G	L	I	F	T	M	V	Y	A	S	R	V	K	K	N	P	L	L	S
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	L	A	V	V	W	L	W	F	L	G	M	M	I	M	A	V	G	L	H	W	A	G	L	L	N	V	P	R	R	A	Y	I	A	Q	V	P	D	A	Y	P	H	A	A	V	P	M	V	F	N	V	L	A	G	I	V	L	L	V	A	L	L	L	F	I	Y	G	L	F	S	V	L	L	S	R	E	R	K	P
Template Known Secondary structure																											T	T		B	S	S			G	G	G	S	G	G	G		G	G	G																														T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	V	H	E	S	D	R	F	F	R	E	K	Q	A	D	V	E	Q	R	P	F	T	F	.	G	D	W	L	V	L	I	V	L	T	A	V	M	V	W	V	I	W	G	V	I	V
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		E	L	A	E	A	P	L	P	F	A	E	V	I	S	G	P	E	D	R	R	L	V	L	A	M	D	R	I	G	F	W	F	A	V	A	A	I	L	V	V	L	A	Y	G	P	T
Template Known Secondary structure					S	S							B				S	S									T
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions