Job Description P39263 Confidence 46.13% Date Thu Jan 5 11:58:35 GMT 2012 Rank 1 Aligned Residues 134 % Identity 12% Template c3qnqD_ PDB info PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Resolution 3.29 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		T	G	T	I	D	N	G	I	L	A	L	I	R	H	T	R	G	N	E	I	L	F	I	P	A	L	F	I	L	F	S	L	G	G	A	V	F	G	M	G	E	E	A	V	A	F	A	I	I	.	.	.	.	.	.	I	A	P	L	M	V	R	L	G	Y	D	S	I	T	T	V	L	V	T	Y	I	A	T	Q	I
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																								.	.	.	.																								.	.	.	.	.	.								.	.	.	.
Template Conservation																								.	.	.	.																																					.	.	.	.
Template Sequence		S	G	A	T	L	A	L	V	V	G	M	L	L	F	A	R	S	Q	Q	L	K	S	.	.	.	.	L	G	R	L	S	I	A	P	G	I	F	N	I	N	E	M	V	T	F	G	M	P	I	V	M	N	P	L	L	L	I	P	F	I	V	V	.	.	.	.	P	V	V	L	T	I	V	S	Y	F	A	M	E	W
Template Known Secondary structure		S	S	S	T													S						.	.	.	.					T	S					T	T									T	T		T	T		T	T	T								.	.	.	.														T
Template Predicted Secondary structure																								.	.	.	.																																					.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	F	A	S	S	W	M	.	N	P	F	C	V	V	V	A	Q	G	I	A	G	V	P	V	L	S	G	S	G	L	R	I	V	V	W	V	I	A	T	L	I	G	L	I	F	T	M	V	Y	A	S	R	V	K	K	N	P	L	L	S	R	V	H	E	S	D	R	F	F
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	L	V	A	R	P	S	G	A	A	V	T	W	T	T	P	I	L	F	S	G	Y	L	G	S	G	G	K	I	S	G	V	I	L	Q	L	V	N	F	A	L	A	F	V	I	Y	L	P	F	L	K	I	W	D	K	Q	K	I	A	E	E	K	G	E	A	A	A	E	N
Template Known Secondary structure		T	S	S					S					T	T	S									T	T	T	T		T	T	T																															T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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