Return to main results Retrieve Phyre Job Id

Job DescriptionP39263
Confidence3.55%DateThu Jan 5 11:58:35 GMT 2012
Rank51Aligned Residues26
% Identity19%Templatec3hd7A_
PDB info PDB header:exocytosisChain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   478.480.........490.........500...
Predicted Secondary structure 
Query SS confidence 

























Query Sequence  WLKVGATLLGLLFIMSSVVVIGAQLM
Query Conservation    
  

   
  
   
 
 
    
Alig confidence 

























Template Conservation 
    
  


   
   
  

  
Template Sequence  WWKNLKMMIILGVICAIILIIIIVYF
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 

























   8990.........100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions