Job Description P39263 Confidence 5.52% Date Thu Jan 5 11:58:35 GMT 2012 Rank 18 Aligned Residues 151 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		T	G	T	I	D	N	G	I	L	A	L	I	R	H	T	R	G	N	E	I	L	F	I	P	A	L	F	I	L	F	S	L	G	G	A	V	F	G	M	.	.	.	.	.	.	.	.	.	.	.	G	E	E	A	V	A	F	A	I	I	I	A	P	L	M	V	R	L	G	Y	.	D	S	I	T	T	V	L	V	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H
Template Known Secondary structure																		S																			T	T	T	T	T	T																											T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	T	Q	I	G	F	A	S	S	W	M	N	P	F	C	V	V	V	A	Q	G	I	A	G	V	P	V	L	S	G	S	G	L	R	I	V	V	W	V	I	A	T	L	I	G	L	I	F	T	M	V	Y	A	S	R	V	K	K	N	P	L	L	S	R	V	H	E	S	D	R	F	F	R	E	K	Q	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	L	R	V	S	S	Q	E	E	Y	V	G	L	D	L	S	Q	H
Template Known Secondary structure																						S				G	G	G	T																																		T		S	B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		277	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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