Job Description P19926 Confidence 3.12% Date Thu Jan 5 11:37:37 GMT 2012 Rank 96 Aligned Residues 44 % Identity 16% Template c3mu3A_ PDB info PDB header:immune system Chain: A: PDB Molecule:protein md-1; PDBTitle: crystal structure of chicken md-1 complexed with lipid iva Resolution 2.40 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		K	I	V	F	Q	R	W	H	D	S	K	A	N	R	D	L	M	K	I	E	Y	V	Y	Q	S	A	E	Q	L	R	N	A	D	A	L	T	L	Q	A	P	A	Q	R	V	T	L	E	L	S	G	C	P	I	D	A	D	G	F	.	.	C	P	M
Query Conservation																																																												.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	M	V	L	R	Q	S	I	K	E	L	Y	A	K	V	D	L	I	I	N	G	K	T	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	E	T	L	C	G	P	G	L	S	K	L	I	F	C	G	K
Template Known Secondary structure								S	S			S	S										T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T					T	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions