Job Description P0AFK4 Confidence 1.11% Date Thu Jan 5 11:26:35 GMT 2012 Rank 75 Aligned Residues 77 % Identity 13% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	G	W	L	V	L	F	V	F	L	P	N	L	M	I	I	G	T	S	F	L	T	R	D	D	A	S	F	V	K	M	V	F	T	L	D	N	Y	T	R	L	L	D	P	L	Y	F	E	V	L	L	H	S	L	N	M	A	L	I	A	T	L	A	C	L	V	L	G	Y	P	F	A	W	F	L	A	K	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	.	.	.	.	.	.	.	.	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E
Template Known Secondary structure																								T	T	S														.	.	.	.	.	.	.	.							T	T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		84	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	K	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	A	G	E
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions