Job Description P0AFK4 Confidence 100.00% Date Thu Jan 5 11:26:35 GMT 2012 Rank 4 Aligned Residues 242 % Identity 19% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		M	I	V	T	I	V	G	W	L	V	L	F	V	F	L	P	N	L	M	I	I	G	T	S	F	L	T	R	D	D	A	S	F	V	K	M	V	F	T	L	D	N	Y	T	R	L	L	.	D	P	L	Y	F	E	V	L	L	H	S	L	N	M	A	L	I	A	T	L	A	C	L	V	L	G	Y	P	F	A	W	F
Query Conservation																																																	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	F	N	F	D	E	F	L	K	A	A	S	D	P	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T	L	I	A	V	I	F	G	T	P	L	A	Y	I
Template Known Secondary structure																								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.													.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	L	P	H	K	V	R	P	L	L	L	F	L	L	I	V	P	F	W	T	N	S	L	I	R	I	Y	G	L	K	I	F	L	S	T	K	G	Y	L	N	E	F	L	L	W	L	G	V	I	D	T	P	I	R	I	M	F	T	P	S	A	V	I	I	G	L	V	Y	I	L	L	P	F	M	V	M	P	L
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	L	I	G	S	F	S	P	.	.	.	.	.	.	.	.	L	K	F	V	D	A	L	P	G	I	V	V	A	M	L	F	V	S	V	P	I	Y	I	N	Q	A
Template Known Secondary structure				S				S	S														S														S	T	T	S	T	T	T	T	T		S	.	.	.	.	.	.	.	.	S			T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	S	I	E	K	L	D	K	P	L	L	E	A	A	R	D	L	G	A	S	K	L	Q	T	F	I	R	I	I	I	P	L	T	M	P	G	I	I	A	G	C	L	L	V	M	L	P	A	M	G	L	F	Y	V	S	D	L	M	G	G	A	K	N	L	L	I	G	N	V	I	K	V	Q	F	L	N	I	R	D
Query Conservation
Alig confidence																																																														.															.
Template Conservation																																																														.															.
Template Sequence		K	E	G	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V	V	V	I	A	.	Y	Y	P	M	I	A	P	T	L	I	Y	E	R	Y	.	L	S	E	G
Template Known Secondary structure								S											T	T										T																													T	T		.		S	S												.
Template Predicted Secondary structure																																																														.															.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	F	G	A	A	T	S	I	T	L	T	I	V	M	G	L	M	L	L	V	Y	W	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I
Template Known Secondary structure		G	G	G	T																					T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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