 |
Job Description | P0A8N5 | Confidence | 96.79% | Date | Thu Jan 5 11:08:20 GMT 2012 |
Rank | 99 | Aligned Residues | 105 |
% Identity | 24% | Template | d1jjcb5 |
SCOP info | Class II aaRS and biotin synthetases
| Class II aaRS and biotin synthetases
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
|
Resolution | 2.60 |
|
 |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
. | . | |
. | |
|
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
| . |
| . | . |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
| . |
| . |
. |
|
|
|
|
Query Sequence |   |
K | I | L | A | A | I | R | Q | F | M | V | A | R | G | F | M | E | V | E | T | P | M | M | Q | V | . |
. |
. |
. |
I | P | G | G | A | S | A | R | P | F | I | T | H | H | N | A | L | D | L | D | M | Y | L | R | I | A | P | E | L | Y | L | K | R | L | V | V | G | . |
. |
. |
. |
G | F | . |
E | . |
. |
R | V | F | E |
Query Conservation |   |
  |
|   |   |   |
|
|   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|   |   | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|   |
|
|
|   | . | . | . | . |
|   | . |   | . | . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
| . |
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
R | K | E | Q | R | L | R | E | V | L | S | G | L | G | F | Q | E | V | Y | T | Y | S | F | M | D | P | E | D | A | R | R | F | R | L | D | P | P | R | L | L | L | L | N | P | L | A | P | E | K | A | A | L | R | T | H | L | F | P | G | L | V | R | V | L | K | E | N | L | D | L | D | R | P | E | R | A | L | L | F | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
|
|
|
| S |  |  |
| T | T |  |  |  |  | T | T |
|
|
|
| S |
| B |
| S | S |
| S | S | G | G | G | S |  |  |
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
  |
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | R | N | F | R | N | E | G | I | S | V | R | H | N | P | E | F | T | M | M | E | L | Y | M | A | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | Y | H | D | L | I | E | L | T | E | S | L | F | R | T | L |
Query Conservation |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|   |   |
|
Template Sequence |   |
V | G | R | V | F | R | E | R | . |
. |
. |
. |
. |
. |
. |
. |
E | E | T | H | L | A | G | L | L | F | G | E | G | V | G | L | P | W | A | K | E | R | L | S | G | Y | F | L | L | K | G | Y | L | E | A | L | F | A | R | L |
Template Known Secondary structure |   |
 |  |  |  |  | S | S | S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | S |
| B | S |
| T | T | S | S |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
573 | . | . | . | . | . | . | 580 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|