Job Description P0A8N5 Confidence 97.99% Date Thu Jan 5 11:08:20 GMT 2012 Rank 87 Aligned Residues 113 % Identity 17% Template c3ikmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.				.	.
Predicted Secondary structure																																																												.	.	.	.	.													.	.	.
Query SS confidence																																																												.	.	.	.	.													.	.	.
Query Sequence		F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	V	A	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	G	G	A	S	A	R	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	L	R	I	A	P	E	.	.	.	.	.	L	Y	L	K	R	L	V	V	G	G	F	E	.	.	.	R	V
Query Conservation																																																												.	.	.	.	.													.	.	.
Alig confidence																																				.	.	.	.	.	.																			.	.	.	.	.													.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		V	E	L	R	K	N	L	A	A	E	W	W	T	S	V	V	V	F	R	E	Q	V	F	P	V	D	A	L	H	H	K	P	G	P	.	.	.	.	.	.	L	L	P	G	D	S	A	F	R	S	G	K	L	R	E	N	L	L	H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	K	R	L	P	Y	G	L
Template Known Secondary structure																			S	S			B							S						.	.	.	.	.	.	S	S	S	S				S	S				S		S																G	G	G	S						B
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	.	.	.	.	.	.	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	H	D	L	I	E	L	T	E	S	L	F	R	T	L	A	Q
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.												.
Template Conservation																																		.
Template Sequence		A	Q	I	G	V	C	F	H	P	V	F	D	T	K	Q	I	R	N	G	V	K	S	I	G	E	K	T	E	A	S	L	V	.	W	F	T	P	P	R	T	S	N	Q	W	L	D	F	W	L	R	H	R	L	Q
Template Known Secondary structure																	S	S	S		S													.					T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions