Job Description P0A8N5 Confidence 100.00% Date Thu Jan 5 11:08:20 GMT 2012 Rank 26 Aligned Residues 233 % Identity 20% Template c2zimA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyrrolysyl-trna synthetase; PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate Resolution 2.10 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	K	A	L	R	P	L	P	D	K	F	H	G	L	Q	D	Q	E	V	R	Y	R	Q	R	Y	L	D	L	I	A	N	D	K	S	R	Q	T	F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	V	A	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	G	G	A	S	A	R	P	F	I
Query Conservation
Alig confidence													.																													.	.	.
Template Conservation													.																													.	.	.
Template Sequence		L	L	N	P	K	D	E	S	G	K	P	.	F	R	E	L	E	S	E	L	L	S	R	R	K	K	D	L	Q	Q	I	Y	A	E	E	R	E	N	Y	L	.	.	.	G	K	L	E	R	E	I	T	R	F	F	V	D	R	G	F	L	E	I	K	S	P	I	L	I	P	L	E	Y	I	E	R	M	G	I	D	E
Template Known Secondary structure					T	T					S		.																						T	T						.	.	.														T	T								S				T						T	T
Template Predicted Secondary structure													.																													.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		225	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.
Predicted Secondary structure								.	.	.	.															.	.	.	.																																											.	.
Query SS confidence								.	.	.	.															.	.	.	.																																											.	.
Query Sequence		T	H	H	N	A	L	.	.	.	.	D	L	D	M	Y	L	R	I	A	P	E	L	Y	L	.	.	.	.	K	R	L	V	V	G	G	F	E	R	V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	.	.	Y	H	D	L	I	E	L	T
Query Conservation								.	.	.	.															.	.	.	.																																											.	.
Alig confidence								.	.	.	.															.	.	.	.																																											.	.
Template Conservation
Template Sequence		L	S	K	Q	I	F	R	V	D	K	N	F	C	L	R	P	M	L	A	P	N	L	Y	N	Y	L	R	K	L	D	R	A	L	P	D	P	I	K	I	F	E	I	G	P	C	Y	R	K	E	S	D	G	K	E	H	L	E	E	F	T	M	L	N	F	C	Q	M	G	S	G	C	T	R	E	N	L	E	S	I	I
Template Known Secondary structure			G	G	G					T	T	T					S		S												T	T	T	S		S	S														S			S	S			S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	F	R	T	L	A	Q	E	V	L	G	T	T	K	V	T	Y	G	E	H	V	F	D	F	G	K	P	F	E	K	L	T	M	R	E	A	I	K	K	Y	R	P	E	T	D	M	A	D	L	D	N	F	D	A	A	K	A	L	A	E	S	I	G	I	T	V	E	K	S	W	G	L	G	R	I	V	T	E
Query Conservation
Alig confidence									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	F	L	N	H	L	.	.	.	.	.	G	I	D	F	K	I	V	G	D	S	C	M	V	Y	G	D	T	L	D	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	D	L	E	L	S	S	A	V
Template Known Secondary structure									.	.	.	.	.	T											T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																																						.	.	.	.	.	.	.	.	400	.
		375	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		I	F	D	E	V	A	E	A	H	L	I	.	.	Q	P	T	F	I	T	E	Y	P	A	E	V	S	P	L	A	R	R	N	D	V	N	P	E	I	T	D	R	F	E	F	F	I	G	G	R	E	I
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		V	G	P	I	P	L	D	R	E	W	G	I	D	K	P	W	I	G	A	G	F	G	L	E	R	L	L	K	V	K	H	D	F	K	N	I	K	R	A	A	R	S	E	S	Y	Y	N	G	I	S	T
Template Known Secondary structure			S			G	G	G	G	G	G	T			S																		T		S	S	G	G	G	G	S	S		S	S			T	T			S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions