Job Description P0A8N5 Confidence 100.00% Date Thu Jan 5 11:08:20 GMT 2012 Rank 9 Aligned Residues 414 % Identity 19% Template c2xgtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate Resolution 1.90 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																													.																																																		.	.	.
Query SS confidence																													.																																																		.	.	.
Query Sequence		K	D	N	Q	E	L	E	S	L	N	I	E	V	S	V	A	G	R	M	M	T	R	R	I	M	G	K	.	A	S	F	V	T	L	Q	D	V	G	G	R	I	Q	L	Y	V	A	R	D	S	L	P	E	G	V	Y	N	D	Q	F	K	K	W	D	L	G	D	I	I	G	A	R	G	T	L	F	K	T	.	.	.
Query Conservation																													.																																																		.	.	.
Alig confidence																													.																									.	.	.	.																						.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		K	I	R	D	L	V	K	H	R	N	E	R	V	C	I	K	G	W	I	H	R	M	R	R	Q	G	K	S	L	M	F	F	I	L	R	D	G	T	G	F	L	Q	V	L	L	M	D	K	L	C	Q	T	.	.	.	.	Y	D	A	L	T	V	N	T	E	C	T	V	E	I	Y	G	A	I	K	E	V	P	E	E
Template Known Secondary structure			G	G	G	G	G	G		T	T	S															T	T	S									S	S									G	G	G	G	S	S	.	.	.	.								T	T
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Q	T	G	E	L	S	I	H	C	T	E	L	R	L	L	T	K	A	.	L	R	P	L	P	D	K	F	H	G	L	Q	D	Q	E	V	R	Y	R	Q	R	Y	L	D	L	I	A	N	D	K	S	R	Q	T	F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	V	A	R	G	F	M	E	V	E	T	P	M
Query Conservation																				.
Alig confidence																				.																										.
Template Conservation																																														.
Template Sequence		A	P	N	G	H	E	L	I	A	D	F	W	K	I	I	G	N	A	P	P	G	G	I	D	N	V	L	N	E	E	A	S	V	D	K	M	L	D	N	R	H	L	V	I	.	R	G	E	N	A	A	A	L	L	R	L	R	A	A	A	T	R	A	M	R	E	H	F	Y	N	A	G	Y	V	E	V	A	P	P	T
Template Known Secondary structure			G	G	G																T	T	T	T	T	T	T	S		T	T									T					T	.	T	S																								T	T								S
Template Predicted Secondary structure																																														.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		M	Q	V	I	P	G	G	A	S	A	R	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	L	R	I	A	P	E	L	Y	L	K	R	L	V	V	G	G	F	E	R	V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	.	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	H	D
Query Conservation																																																													.
Alig confidence															.	.																							.																						.
Template Conservation															.	.																							.
Template Sequence		L	V	Q	T	Q	V	E	G	G	S	T	L	F	.	.	N	L	D	Y	F	G	E	Q	S	F	L	T	Q	S	S	Q	L	Y	L	E	T	C	.	I	P	T	L	G	D	V	F	C	I	A	Q	S	Y	R	A	E	K	S	R	T	R	R	H	L	A	E	Y	A	H	V	E	A	E	C	P	F	I	T	L	D	D
Template Known Secondary structure				S			S	S		G	G	G			.	.					T	T							S		S								.					S	S													S		B	T	T	B		S											S
Template Predicted Secondary structure															.	.																							.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		L	I	E	L	T	E	S	L	F	R	T	L	A	Q	E	V	L	G	T	T	K	V	T	Y	G	E	H	V	F	D	.	.	.	.	.	F	G	K	P	F	E	K	L	T	M	R	E	A	I	K	K	Y	R	P	E	T	D	M	A	D	L	D	N	F	D	A	A	K	A	L	A	E	S	I	G	I	T	V	E	K
Query Conservation																																.	.	.	.	.
Alig confidence																																.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	E	K	I	E	E	L	V	C	D	T	V	D	R	L	L	A	D	E	E	A	K	K	L	L	E	H	I	N	P	K	F	Q	P	P	E	R	P	F	L	R	M	E	Y	K	D	A	I	K	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	H	N	V	E	N	E	F	G	N
Template Known Secondary structure																			T	S												T	T						S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		B		T	T	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400																		.	.	.	.	.	.	.	.	.	410	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																						.																						.
Query SS confidence																																						.																						.
Query Sequence		S	W	G	L	G	R	I	V	T	E	I	F	D	E	V	A	E	A	H	L	I	Q	P	T	F	I	T	E	Y	P	A	E	V	S	P	L	.	A	R	R	N	D	V	N	P	E	I	T	D	R	F	E	F	F	I	G	G	R	.	E	I	G	N	G	F	S	E	L	N	D	A	E	D	Q	A	E	R	F	Q	E
Query Conservation																																						.																						.
Alig confidence																																						.																						.
Template Conservation
Template Sequence		T	F	T	Y	G	E	D	I	A	E	A	A	E	R	F	M	T	D	T	I	N	K	P	I	L	L	N	R	F	P	S	E	I	K	A	F	Y	M	Q	R	D	A	Q	D	N	T	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V	G	G	S	M	R	I	W	K	F	D	E	L	S	K	A	F	K	N
Template Known Secondary structure		B			T	T	S															T	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							T	T	T									B
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	N	A	K	A	A	G	D	D	E	A	M	F	Y	D	E	D	Y	V	T	A	L	E	Y	G	L	P	P	T	A	G	L	G	I	G	I	D	R	M	I	M	L	F	T	N	S	H	T	I	R	D	V	I	L	F	P	A	M	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		V	E	I	D	P	K	P	.	.	.	.	.	.	.	.	Y	Y	W	Y	L	D	Q	R	L	Y	G	T	C	P	H	G	G	Y	G	L	G	L	E	R	F	I	C	W	L	T	N	T	N	H	I	R	D	V	C	L	Y	P	R	F	V
Template Known Secondary structure		T	T			S	G	G	.	.	.	.	.	.	.	.	G									T	T																				T		S	S	G	G	G	G	S	S	S			B	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.									.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.