Job Description P0A8N5 Confidence 96.40% Date Thu Jan 5 11:08:20 GMT 2012 Rank 100 Aligned Residues 83 % Identity 24% Template c2k50A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:replication factor a related protein; PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a. Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																	.	.	.	.	.	.	.					.	.	.																																																			.
Query SS confidence																	.	.	.	.	.	.	.					.	.	.																																																			.
Query Sequence		S	L	N	I	E	V	S	V	A	G	R	M	M	T	R	.	.	.	.	.	.	.	R	I	M	G	.	.	.	K	A	S	F	V	T	L	Q	D	V	G	G	R	I	Q	L	Y	V	A	R	D	S	L	P	E	G	V	Y	N	D	Q	F	K	K	W	D	L	G	D	I	I	G	A	R	G	T	L	F	K	T	.
Query Conservation																	.	.	.	.	.	.	.					.	.	.																																																			.
Alig confidence																	.	.	.	.	.	.	.					.	.	.																								.	.	.	.	.	.																						.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		E	E	G	A	E	T	P	V	T	G	R	V	M	K	I	S	S	P	R	T	F	T	T	R	K	G	R	E	G	K	L	A	N	V	I	I	A	D	D	T	G	E	L	R	A	V	F	W	T	E	N	I	.	.	.	.	.	.	K	L	L	K	K	F	R	E	G	D	V	I	R	I	K	D	V	N	I	R	G	G
Template Known Secondary structure			T	T																					T	T	S	S												T	T									T	T	G	G	.	.	.	.	.	.	G	G	G	G	T			T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		Q	T	G	E	L	S	I	H	C	.	.	.	T	E	L	R	L	L	T	K	A	L	R
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		F	G	G	R	K	E	A	H	L	M	P	R	S	T	V	E	V	L	D	P	L	E	H
Template Known Secondary structure		S	S	S	S							T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions