Job Description P0A8N5 Confidence 98.62% Date Thu Jan 5 11:08:20 GMT 2012 Rank 79 Aligned Residues 130 % Identity 17% Template c2dq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog Resolution 2.60 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																			.	.	.	.																																								.	.	.	.
Query SS confidence																																			.	.	.	.																																								.	.	.	.
Query Sequence		Q	T	F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	V	A	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	.	.	.	.	P	G	G	A	S	A	R	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	L	R	I	A	P	E	L	Y	L	K	R	L	V	V	G	G	F	E	.	.	.	.
Query Conservation																																			.	.	.	.																																								.	.	.	.
Alig confidence																																			.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		E	I	V	I	L	D	L	A	L	I	R	F	A	L	D	R	L	I	E	K	G	F	T	P	V	I	P	P	Y	M	V	R	R	F	V	E	E	G	S	T	S	F	E	D	F	E	D	V	I	Y	K	V	E	D	E	D	L	Y	L	I	P	T	A	E	H	P	L	A	G	M	H	A	N	E	I	L	D	G	K	D
Template Known Secondary structure																					T	T								S									T	T	S		T	T					T			B		T	T	S	S					S	S	T							T	T	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
					254	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.													.	.	.	.	.	.					.
Query SS confidence		.	.	.													.	.	.	.	.	.					.
Query Sequence		.	.	.	R	V	F	E	I	N	R	N	F	R	N	E	.	.	.	.	.	.	G	I	S	V	.	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	H	D	L	I	E	L	T	E	S	L	F	R	T	L	A	Q	E	V	L	G	T	T	K	V	T	Y
Query Conservation		.	.	.													.	.	.	.	.	.					.
Alig confidence		.	.	.													.	.	.	.	.	.					.														.																.
Template Conservation																																									.																.
Template Sequence		L	P	L	L	Y	V	G	V	S	P	C	F	R	K	E	A	G	T	A	G	K	D	T	K	G	I	F	R	V	H	Q	F	H	K	V	E	Q	F	V	.	Y	S	R	P	E	E	S	W	E	W	H	E	K	I	I	.	R	N	A	E	E	L	F	Q	E	L	E	I	P	Y
Template Known Secondary structure			S														T	T		S	S		S			S	S	S	S		S										.				T	T	T										.										T	T
Template Predicted Secondary structure																																									.																.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions