Job Description P0A8N5 Confidence 94.72% Date Thu Jan 5 11:08:20 GMT 2012 Rank 107 Aligned Residues 83 % Identity 11% Template c1ynxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) Resolution UNK

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		65	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																													.
Query SS confidence												.	.	.	.	.	.	.	.	.																																																													.
Query Sequence		N	I	E	V	S	V	A	G	R	M	.	.	.	.	.	.	.	.	.	M	T	R	R	I	M	G	K	A	S	F	V	T	L	Q	D	V	G	G	R	I	Q	L	Y	V	A	R	D	S	L	P	E	G	V	Y	N	D	Q	F	K	K	W	D	L	G	D	I	I	G	A	R	G	T	L	F	K	T	Q	T	G	.
Query Conservation												.	.	.	.	.	.	.	.	.																																																													.
Alig confidence												.	.	.	.	.	.	.	.	.																											.	.	.	.	.																														.
Template Conservation																																															.	.	.	.	.
Template Sequence		Q	N	V	W	T	I	K	A	R	V	S	Y	K	G	E	I	K	T	W	H	N	Q	R	G	D	G	K	L	F	N	V	N	F	L	D	T	S	G	E	I	R	A	T	A	F	.	.	.	.	.	N	D	F	A	T	K	F	N	E	I	L	Q	E	G	K	V	Y	Y	V	S	K	A	K	L	Q	P	A	K	P	Q
Template Known Secondary structure		T																					S	S													T	T									.	.	.	.	.											S		S	S	S						S								T	T
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	L	S	I	H	C	T	E	L	R	L	L	T	K	A	L	R	P
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	N	L	T	H	P	Y	E	L	N	L	D	R	D	T	V	I	E	E	C	F	D	E
Template Known Secondary structure		T	S	S	S	S	S								S	S						S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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