Job Description P0A8N5 Confidence 99.06% Date Thu Jan 5 11:08:20 GMT 2012 Rank 65 Aligned Residues 113 % Identity 16% Template c1ggmB_ PDB info PDB header:ligase Chain: B: PDB Molecule:protein (glycyl-trna synthetase); PDBTitle: glycyl-trna synthetase from thermus thermophilus complexed with2 glycyl-adenylate Resolution 3.40 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																																				.	.	.
Predicted Secondary structure																	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	.	.	V	A	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	G	G	A	S	A	R	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	H
Query Conservation																	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		V	E	L	K	N	N	L	K	Q	A	W	W	R	R	N	V	Y	E	R	D	D	M	E	G	L	D	A	S	V	L	T	H	.	.	.	.	.	.	R	L	V	L	H	Y	S	G	H	E	A	T	F	A	D	P	M	V	D	N	A	K	A	R	Y	W	T	P	P	R	Y	F	N	M	M	F	Q	D	L	R	G	P
Template Known Secondary structure																		T	S		S	S								S				.	.	.	.	.	.							T	S	T	T	G	G	G		S		B				S	S	S							B					S						S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.														.	.	.													.	.	.
Query SS confidence																.	.	.	.	.														.	.	.													.	.	.
Query Sequence		H	N	A	L	D	L	D	M	Y	L	R	I	A	P	.	.	.	.	.	E	L	Y	L	K	R	L	V	V	G	G	F	E	.	.	.	R	V	F	E	I	N	R	N	F	R	N	E	.	.	.	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	H	D	L	I	E	L	T	E
Query Conservation																.	.	.	.	.														.	.	.													.	.	.
Alig confidence																.	.	.	.	.														.	.	.													.	.	.																	.
Template Conservation																																																																				.
Template Sequence		R	G	G	R	G	L	L	A	Y	L	R	P	E	T	A	Q	G	I	F	V	N	F	K	N	V	L	D	A	T	S	R	K	L	G	F	G	I	A	Q	I	G	K	A	F	R	N	E	I	T	P	R	N	F	I	F	R	V	R	E	F	E	Q	M	E	I	E	.	Y	F	V	R	P	G	E	D	E	Y	W	H	R
Template Known Secondary structure		S			G	G	G						S	S	T																			S	S														S	S		B	T	T	T	T	B		S									.					G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.
		296	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	R	T	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	V	E	E	R	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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