Job Description P0A8N5 Confidence 97.89% Date Thu Jan 5 11:08:20 GMT 2012 Rank 88 Aligned Residues 116 % Identity 15% Template c1g5hA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:mitochondrial dna polymerase accessory subunit; PDBTitle: crystal structure of the accessory subunit of murine mitochondrial2 polymerase gamma Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	V	R	S	K	I	L	A	A	I	R	Q	F	M	V	A	.	.	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	G	G	A	S	A	R	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	H	H	N	A	L	D	L	D	M	Y	L	R	I	A	P	E
Query Conservation																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	L	R	K	N	L	A	S	Q	W	W	S	S	X	V	V	F	R	E	Q	V	F	A	V	D	S	L	H	Q	E	P	G	S	S	Q	P	R	D	S	A	F	R	L	V	S	P	E	S	I	R	E	I	L	Q	D	S	K	E	Q	L	V	A	F	L	E	N	L	L	K	T	S	G	K	L	R	A	T	L	L
Template Known Secondary structure																	T	T	T		T	T								S							S	S						B																													S					S		S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		242						.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure			.	.	.	.	.												.	.	.
Query SS confidence			.	.	.	.	.												.	.	.
Query Sequence		L	.	.	.	.	.	Y	L	K	R	L	V	V	G	G	F	E	.	.	.	R	V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	H	D	L	I	E	L	T	E	S	L	F	R	T	L	A	Q
Query Conservation			.	.	.	.	.												.	.	.
Alig confidence			.	.	.	.	.												.	.	.													.	.	.														.
Template Conservation																																		.	.	.														.
Template Sequence		H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	R	K	L	P	F	G	L	A	Q	I	G	V	C	F	H	P	V	.	.	.	S	T	R	V	G	E	K	T	E	A	S	L	V	.	W	F	T	P	T	R	T	S	S	Q	W	L	D	F	W	L	R	H	R	L	L
Template Known Secondary structure							T								T	T	T	B	S															.	.	.														.
Template Predicted Secondary structure																																		.	.	.														.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions