|   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
. | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
. | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | Y | V | L | S | S | S | F | G | I | Q | A | A | V | S | L | H | L | V | N | Q | I | R | P | D | I | P | V | I | L | T | D | T | G | Y | L | F | P | E | T | Y | R | F | I | D | E | L | T | D | K | L | K | . |
L | N | L | K | V | Y | R | A | T | E | S | A | . |
. |
. |
. |
A | W | Q | E | A | R | Y | G | K | L |
Query Conservation |   |
  |   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
| . |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | K | V | V | L | A | Y | S | G | G | L | D | T | S | V | I | L | K | W | L | C | E | K | G | F | D | V | I | A | Y | V | A | N | V | G | . |
. |
Q | K | D | D | F | V | A | I | K | E | K | A | L | K | T | G | A | S | K | V | Y | V | E | D | L | R | R | E | F | V | T | D | Y | I | F | T | A | L | L | G | N | A | M |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | S | S | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T |  |  |  |  |  | T | T | T |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | E | Q | G | V | E | G | I | E | K | Y | N | D | I | N | K | V | E | P | M | N | R | A | L | K | E | L | N | A | Q | T | W | F | A | G | L | R | R | E | Q | S | G | . |
S | R | A | N | L | P | V | L | A | I | Q | R | G | V | F | K | V | L | P | . |
. |
. |
. |
. |
I | I | D | W | D | N | R | T | I | Y | Q | Y | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|
Template Sequence |   |
Y | E | G | R | Y | L | L | G | T | A | I | A | R | P | L | I | A | K | R | Q | V | E | I | A | E | K | E | G | A | Q | Y | V | A | H | G | A | T | G | K | G | N | D | Q | V | R | F | E | L | T | Y | A | A | L | N | P | N | L | K | V | I | S | P | W | K | D | P | E | F | L | A | K | F | K | T | D | L | I | N | Y | A |
Template Known Secondary structure |   |
B | T | T | T | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
|
|
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |
| G | G | G |
|  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
195 | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | H | G | L | K | Y |
Query Conservation |   |
  |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
Template Sequence |   |
M | E | K | G | I | P | I |
Template Known Secondary structure |   |
 |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . |
  |