Job Description P17854 Confidence 98.78% Date Thu Jan 5 11:36:21 GMT 2012 Rank 42 Aligned Residues 163 % Identity 10% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.				.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.		.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.		.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	G	R	V	A	W	A	L	D	N	L	.	.	.	P	.	G	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	.	.	.	.	.	.	.	.	.	.	.	R	P	D	I	P	V	I	L	T	D	T	G	Y	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L
Query Conservation														.	.	.		.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.		.																								.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																	.
Template Sequence		I	E	R	R	V	A	F	I	K	R	K	L	T	E	A	R	Y	K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	.	E	Q	K	D	E	D	E	A	Q	L	A	L	S	F	I	R
Template Known Secondary structure																	T										S	S																					T	T		S											S	S	.	S		S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																	.	.	.	.	.
Query Sequence		K	L	N	L	K	V	Y	R	A	T	E	S	A	A	W	Q	E	A	R	Y	G	.	.	.	.	.	K	L	W	E	Q	G	V	E	G	I	E	K	Y	N	D	I	.	.	.	.	.	N	K	V	E	P	M	N	R	A	L	K	E	L	N	A	Q	T	W	F	A	G	L	R	R	E	Q	S	G	S	R	A	N	L
Query Conservation																							.	.	.	.	.																	.	.	.	.	.
Alig confidence																							.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		P	T	H	S	V	S	V	N	I	K	A	G	V	D	G	L	H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D	H	S	A	E	N	I	T	G	F	Y	T	K
Template Known Secondary structure			S																										T		S		S	S																												T				B											T		S		T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	A	I	Q	R	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T	I	Y	Q	Y	L	Q	K	H	G	L	K
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		F	G	D	G	A	C	D	.	.	.	.	L	A	P	L	F	G	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P
Template Known Secondary structure		T	T	T	T			S	.	.	.	.	B		T	T	T	T													T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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