Job Description P17854 Confidence 99.66% Date Thu Jan 5 11:36:21 GMT 2012 Rank 21 Aligned Residues 171 % Identity 13% Template c3p52B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni2 nctc 11168 in complex with the nitrate ion Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure															.																								.
Query SS confidence															.																								.
Query Sequence		A	E	G	R	V	A	W	A	L	D	N	L	P	.	G	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	.	R	P	D	I	P	V	I	L	T	D	T	G	Y	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L	K	L	N	L	K	V	Y	R	A	T	E	S	A
Query Conservation															.																								.
Alig confidence															.																								.																																							.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		X	C	D	F	I	Q	E	K	V	K	N	S	Q	S	Q	G	V	V	L	G	L	S	G	G	I	D	S	A	L	V	A	T	L	C	K	R	A	L	K	E	N	V	F	A	L	L	X	P	T	Q	I	S	N	K	A	N	L	E	D	A	L	R	L	C	A	D	L	N	L	E	Y	K	I	I	E	I	.	.	.	Q
Template Known Secondary structure												T	S	S		S								S	S															T	T									S			S	S															T									.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	Q	E	A	R	Y	G	K	L	W	E	Q	G	V	E	G	I	E	K	Y	N	D	I	N	K	V	E	P	M	N	R	A	L	K	E	L	N	A	Q	T	W	F	A	G	L	R	R	E	Q	S	G	S	R	A	N	L	P	V	L	A	I	Q	R	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T	I
Query Conservation
Alig confidence																																																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		S	I	L	D	A	F	I	K	Q	S	E	N	T	T	L	V	S	L	G	N	F	A	A	R	I	R	X	S	L	L	Y	D	Y	S	A	L	K	N	S	L	V	I	G	T	S	N	K	S	E	L	L	L	G	Y	G	T	I	Y	G	D	L	A	C	A	.	.	.	.	F	N	P	I	G	S	L	Y	K	S	E	I
Template Known Secondary structure									T	T		S																										T	T				B											T		S		T	T	T	T	T			S	.	.	.	.	B		T	T	T	T	S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Y	L	Q	K	H	G	L	K	Y	H	P	L	W	D	E	G	Y	L	S
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		Y	A	L	A	K	Y	L	N	L	H	.	E	N	F	I	K	K	G	F	S	Y
Template Known Secondary structure								T	T			.
Template Predicted Secondary structure												.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions