Job Description P17854 Confidence 99.61% Date Thu Jan 5 11:36:21 GMT 2012 Rank 27 Aligned Residues 164 % Identity 15% Template c2ywcC_ PDB info PDB header:ligase Chain: C: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: crystal structure of gmp synthetase from thermus thermophilus in2 complex with xmp Resolution 2.20 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		A	E	G	R	V	A	W	A	L	D	N	L	P	.	G	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	R	P	D	I	P	V	I	L	T	D	T	G	Y	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L	K	L	N	L	K	V	Y	R	A	T	E	S	A	A
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		L	E	E	L	L	R	E	V	R	E	R	A	G	K	D	R	V	L	L	A	V	S	G	G	V	D	S	S	T	L	A	L	L	L	A	K	A	G	V	D	H	L	A	V	F	V	D	H	G	L	L	R	L	G	E	R	E	E	V	E	G	A	L	R	A	L	G	V	N	L	L	V	V	D	A	K	E	R	F	L
Template Known Secondary structure														T	T	S								S	S													T	T											S		S		T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		W	Q	E	A	R	Y	G	K	L	W	E	Q	G	V	E	G	I	E	K	Y	N	D	I	N	K	V	E	P	M	N	R	A	L	K	E	L	N	.	A	Q	T	W	F	A	G	L	R	R	E	Q	S	G	S	R	A	N	L	P	V	L	A	I	Q	R	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T	I
Query Conservation																																							.
Alig confidence										.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	K	G	V	E	D	.	.	.	.	.	P	E	E	K	R	K	I	I	G	R	E	F	V	A	A	F	S	Q	V	A	R	E	R	G	P	F	R	F	L	A	Q	G	T	L	Y	P	D	.	.	.	.	.	.	.	.	.	.	.	.	V	I	E	F	E	L	L	E	P	F	R	L	L	F	K	D	E	V
Template Known Secondary structure					T	T				.	.	.	.	.																							S				S											.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320													.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Y	L	Q	K	H	G	L	K	Y	H	P	L	W	D	E	G	Y	L	S	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	L	A	L	L	L	G	L	P	D	T	L	R	L	R	H	P	F	P	G	P	G
Template Known Secondary structure								T	T							T						T	T	G
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions