Job Description P17854 Confidence 99.33% Date Thu Jan 5 11:36:21 GMT 2012 Rank 38 Aligned Residues 168 % Identity 15% Template c2vxoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp Resolution 2.5 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																								.	.
Query SS confidence																.																								.	.
Query Sequence		A	E	G	R	V	A	W	A	L	D	N	L	P	G	.	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	R	.	.	P	D	I	P	V	I	L	T	D	T	G	Y	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L	K	L	N	L	K	V	Y	R	A	T	E	S
Query Conservation																.																								.	.
Alig confidence																.																								.	.
Template Conservation
Template Sequence		E	L	E	C	I	R	E	I	K	E	R	V	G	T	S	K	V	L	V	L	L	S	G	G	V	D	S	T	V	C	T	A	L	L	N	R	A	L	N	Q	E	Q	V	I	A	V	H	I	D	N	G	F	M	R	K	R	E	S	Q	S	V	E	E	A	L	K	K	L	G	I	Q	V	K	V	I	N	A	A	H	S
Template Known Secondary structure														T	T									S	S														S		T	T	T									S				T	T	T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.				.	.	.																							.	.	.																			.	.	.
Query SS confidence																								.	.	.	.	.	.				.	.	.																							.	.	.																			.	.	.
Query Sequence		A	A	W	Q	E	A	R	Y	G	K	L	W	E	Q	G	V	E	G	I	E	K	Y	.	.	.	.	.	.	N	D	I	.	.	.	N	K	V	E	P	M	N	R	A	L	K	E	L	N	A	Q	T	W	F	A	G	L	.	.	.	R	R	E	Q	S	G	S	R	A	N	L	P	V	L	A	I	Q	R	.	.	.
Query Conservation																								.	.	.	.	.	.				.	.	.																							.	.	.																			.	.	.
Alig confidence																								.	.	.	.	.	.				.	.	.																							.	.	.																			.	.	.
Template Conservation
Template Sequence		F	Y	N	G	T	T	T	L	P	R	I	S	K	T	L	N	M	T	T	S	P	E	E	K	R	K	I	I	G	D	T	F	V	K	I	A	N	E	V	I	G	E	M	N	L	K	P	E	E	V	F	L	A	Q	G	T	L	R	P	D	L	I	E	S	A	S	L	V	A	S	G	K	A	E	L	I	K	T	H	H
Template Known Secondary structure				T				B				B				G	G	G																										T	T			G	G	G								S	S			S	S									S				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
													175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T	I	Y	Q	Y	L	Q	K	H	G	L	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	T	E	L	I	R	K	L	R	E	E	G	K	V	I	E	P	L	K	D	F	H	K	D	E	V	R	I	L	G	R	E	L	G	L	P
Template Known Secondary structure		S	S										T	T					G	G	G	G	S												T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions