Job Description P17854 Confidence 99.76% Date Thu Jan 5 11:36:21 GMT 2012 Rank 17 Aligned Residues 163 % Identity 16% Template c2dplA_ PDB info PDB header:ligase Chain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3 Resolution 1.43 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																								.														.
Query SS confidence															.																								.														.
Query Sequence		A	E	G	R	V	A	W	A	L	D	N	L	P	.	G	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	.	R	P	D	I	P	V	I	L	T	D	T	G	Y	.	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L	K	L	N	L	K	V	Y	R	A	T	E	S
Query Conservation															.																								.														.
Alig confidence															.																								.														.
Template Conservation
Template Sequence		V	E	E	K	V	R	E	I	R	E	T	V	G	D	S	K	A	I	I	A	L	S	G	G	V	D	S	S	T	A	A	V	L	A	H	K	A	I	G	D	R	L	H	A	V	F	V	N	T	G	F	L	R	K	G	E	P	E	F	V	V	K	T	F	R	D	E	F	G	M	N	L	H	Y	V	D	A	Q	D	R
Template Known Secondary structure														T	T	S								S	S															G	G	G									S				T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	W	Q	E	A	R	Y	G	K	L	W	E	Q	G	V	E	G	I	E	K	Y	N	D	I	N	K	V	E	P	M	N	R	A	L	K	E	L	N	A	Q	T	W	F	A	G	L	R	R	E	Q	S	G	S	R	A	N	L	P	V	L	A	I	Q	R	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T
Query Conservation
Alig confidence												.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	F	S	A	L	K	G	V	T	D	.	.	.	.	.	P	E	E	K	R	K	I	I	G	R	V	F	I	E	V	F	E	E	V	A	K	K	I	G	A	E	Y	L	I	Q	G	T	I	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	L	I	E	P	L	R	D	L	Y	K	D	E
Template Known Secondary structure						T	T	T				.	.	.	.	.																								T		S											.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T
Template Predicted Secondary structure												.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	Q	Y	L	Q	K	H	G	L	K	Y	H	P	L	W	D	E	G	Y	L	S	V	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	E	L	A	K	F	L	G	L	P	E	K	I	Y	N	R	M	P	F	P	G	P	G	L
Template Known Secondary structure									T	T							T						T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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