Job Description P17854 Confidence 99.51% Date Thu Jan 5 11:36:21 GMT 2012 Rank 32 Aligned Residues 153 % Identity 17% Template c2c5sA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain Resolution 2.5 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																		.	.	.	.	.
Query SS confidence																																						.																		.	.	.	.	.
Query Sequence		P	G	E	Y	V	L	S	S	S	F	G	I	Q	A	A	V	S	L	H	L	V	N	Q	I	R	P	D	I	P	V	I	L	T	D	T	G	.	Y	L	F	P	E	T	Y	R	F	I	D	E	L	T	D	K	L	.	.	.	.	.	K	L	N	L	K	V	Y	R	A	T	E	S	A	A	W	Q	E	A	R	Y	G
Query Conservation																																						.																		.	.	.	.	.
Alig confidence																																						.																		.	.	.	.	.																				.	.
Template Conservation																																																																																.	.
Template Sequence		G	G	K	V	M	V	L	L	S	G	G	I	D	S	P	V	A	A	Y	L	T	M	K	R	G	V	S	V	E	A	V	H	F	H	S	P	P	F	T	S	E	R	A	K	Q	K	V	I	D	L	A	Q	E	L	T	K	Y	C	K	R	V	T	L	H	L	V	P	F	T	E	V	Q	K	T	I	N	K	E	.	.
Template Known Secondary structure		T									S	S	S												B	T											T	T	T	S																G	G	G	S	S																				.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		K	L	W	E	Q	G	V	E	G	I	E	K	Y	N	D	I	N	K	V	E	P	M	N	R	A	L	K	E	L	N	A	Q	T	W	F	A	G	L	R	R	E	Q	.	.	S	G	S	R	A	N	L	P	V	L	A	I	Q	R	G	V	F	K	V	L	P	I	I	D	W	D	N	R	T	I	Y	Q	Y	L	Q	K
Query Conservation																																												.	.
Alig confidence		.	.	.	.																																							.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	P	S	S	Y	S	M	T	V	M	R	R	M	M	M	R	I	T	E	R	I	A	E	E	R	N	A	L	A	I	T	T	G	E	S	L	G	Q	V	A	S	Q	T	L	D	S	M	H	T	I	N	E	V	T	N	Y	P	V	I	R	P	L	I	T	M	D	K	L	E	I	I	K	I	A	E	E
Template Known Secondary structure		.	.	.	.	S		G	G	G																				T	T										S	S	S	T	T	S										G	G	G			S					T	T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		197	.							.	200	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		H	G	.	.	.	.	.	.	L	K	Y	H	P
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	T	Y	D	I	S	I	R	P	Y	K	P
Template Known Secondary structure		T	T						T	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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