Return to main results Retrieve Phyre Job Id

Job DescriptionP17854
Confidence99.80%DateThu Jan 5 11:36:21 GMT 2012
Rank14Aligned Residues143
% Identity17%Templatec1ni5A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:putative cell cycle protein mesj; PDBTitle: structure of the mesj pp-atpase from escherichia coli
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60....... ..70.........80... ......90.........100.........110.......
Predicted Secondary structure 




.....









..







Query SS confidence 






















. . . . .















. .

































Query Sequence  PGEYVLSSSFGIQAAVSLHLVNQ. . . . . IRPDIPVILTDTGYLF. . PETYRFIDELTDKLKLNLKVYRATESAAWQEARY
Query Conservation 
  
 

 





 


 
   .....      






 

..


 


       

 
                
Alig confidence 






















.....















..





















............
Template Conservation     



 


 

  

  
           
   






  
      
        
      ............
Template Sequence  SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER. . . . . . . . . . . .
Template Known Secondary structure 
S

SBTTSTT


S

SSTT


............
Template Predicted Secondary structure 





















............
Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........
 
   118.120.........130.........140.........150..... ....160.........170.........180...
Predicted Secondary structure 









..............












Query SS confidence 





































. . . . . . . . . . . . . .



























Query Sequence  GKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAG. . . . . . . . . . . . . . LRREQSGSRANLPVLAIQRGVFKVLPII
Query Conservation 
            

   
  
    
 
      
 
.............. 
 


  
              
 

 
Alig confidence  .


























..







..............



























Template Conservation  .          
  

  

        ..    
  

  

 


 
  
 

    

             





Template Sequence  . VQLAQEGLGIEAQARQARYQAFARTLL. . PGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAXAEVSEFAGTRLIRPLL
Template Known Secondary structure  .




SSSTTTTT

..TT



TTT

TTGGG


STT
GGG
Template Predicted Secondary structure  .






..























Template SS confidence 















































































   80.........90.........100...... ...110.........120.........130.........140.........150......
 
   184.....190.........200..
Predicted Secondary structure 







Query SS confidence 


















Query Sequence  DWDNRTIYQYLQKHGLKYH
Query Conservation   

  

  

    

  
Alig confidence 


















Template Conservation     
 

  
     
   
Template Sequence  ARTRGELVQWARQYDLRWI
Template Known Secondary structure  S

TT


B
Template Predicted Secondary structure 






Template SS confidence 


















   157..160.........170.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions