Return to main results Retrieve Phyre Job Id

Job DescriptionP23331
Confidence98.63%DateThu Jan 5 11:39:23 GMT 2012
Rank39Aligned Residues143
% Identity17%Templated1tf7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.. .......60.........
Predicted Secondary structure 













............









Query SS confidence 


















































. . . . . . . . . . . .
















Query Sequence  AQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSR. . . . . . . . . . . . IGLSSPAKLFNQNSSLF
Query Conservation   

 

 
 






 
          
  
 

 
  
 
     
 
 ............ 
             
 
Alig confidence 


















































............
















Template Conservation 
   

 
  




 
           
  
  

 
     
       
 
                          
Template Sequence  DSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHL
Template Known Secondary structure  S

TTSSTTT

SSS
TTS

TTS



GGGS
Template Predicted Secondary structure 



























Template SS confidence 















































































   281........290.........300.........310.........320.........330.........340.........350.........360
 
   70.........80.........90.... .....100.........110.........120.........130.........140.
Predicted Secondary structure 










........













Query SS confidence 
























. . . . . . . .














































Query Sequence  DEIRAEHEQQAIHCVLVDECQFLTR. . . . . . . . QQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVEL
Query Conservation              










  ........  
  
  
 
  

 

  

  

    
     

  

 
  
Alig confidence 
























........














































Template Conservation    
           





  
               
          


                      
 

 
Template Sequence  QIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILL
Template Known Secondary structure  TT

S
TSSS
TT

SSSS


SS
SS

TTT
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   361........370.........380.........390.........400.........410.........420.........430.........440
 
   142..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  KTI
Query Conservation   
 
Alig confidence 


Template Conservation     
Template Sequence  QYV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   441..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions