Return to main results Retrieve Phyre Job Id

Job DescriptionP23331
Confidence98.25%DateThu Jan 5 11:39:23 GMT 2012
Rank67Aligned Residues140
% Identity17%Templated1tf7a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20....... ..30.........40.........50 .........60
Predicted Secondary structure 






.






....................






Query SS confidence 

























.






















. . . . . . . . . . . . . . . . . . . .









Query Sequence  AQLYFYYSAMNAGKSTALLQSSYNYQ. ERGMRTVVYTAEIDDRFGAGKVS. . . . . . . . . . . . . . . . . . . . SRIGLSSPAK
Query Conservation   

 

 
 






 
        .  
  
 

 
  
 
     
 ....................
  
      
Alig confidence 

























.






















....................









Template Conservation 
 
  
 
  




 
   
           

    
     
                                   
Template Sequence  GRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVV
Template Known Secondary structure  TSSTTSS


SSS
GGGT

TTS



SS

S

Template Predicted Secondary structure 



























Template SS confidence 















































































   3940.........50.........60.........70.........80.........90.........100.........110........
 
   61........70.........80.........90.... .....100.........110.........120.........130.
Predicted Secondary structure 













.........











Query SS confidence 

































. . . . . . . . .




































Query Sequence  LFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTR. . . . . . . . . QQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYL
Query Conservation         
             










  .........  
  
  
 
  

 

  

  

    
     
Alig confidence 

































.........























.











Template Conservation                        
 


                     
          

 
 
  .            
Template Sequence  GGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERI. EEYGPIARYGVE
Template Known Secondary structure  SST
S
STTTSTTT

T

S.SSSS
SSTTS
Template Predicted Secondary structure 

















.









Template SS confidence 















































































   119120.........130.........140.........150.........160.........170.........180..... ....190.......
 
   132.......140..
Predicted Secondary structure 

Query SS confidence 










Query Sequence  LAWSDKLVELK
Query Conservation 
  

 
  
 
Alig confidence 










Template Conservation      
 

 
 
Template Sequence  EFVSDNVVILR
Template Known Secondary structure 
S
Template Predicted Secondary structure 

Template SS confidence 










   198.200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions