Job Description P23331 Confidence 98.25% Date Thu Jan 5 11:39:23 GMT 2012
Rank 68 Aligned Residues 83
% Identity 16% Template c3pfiB_
PDB info
PDB header: hydrolaseChain: B: PDB Molecule: holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution 2.69 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
5 . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
Y F Y Y S A M N A G K S T A L L Q S S Y N Y Q E R G M R T V V Y T A E I D D R F G A G K V S S R I G L S S P A K L F N Q N S S L F D E I R A E H E Q Q A I H C V
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Template Conservation  
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Template Sequence  
I L F S G P A G L G K T T L A N I I S Y .
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E X S A N I K T T A A P X I E K S G D L A A I L T N L S E G D I L
Template Known Secondary structure  
S S T T S S . . . . . . . . . . . . . . . . . . . . . . . . . . . T T G G G S S T T T
Template Predicted Secondary structure  
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Template SS confidence  
   
55 . . . . 60 . . . . . . . . . 70 . . . .
. . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . .
 
   
85 . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
L V D E C Q F L T R Q Q V Y E L S E V V D Q L D I P V L C Y
Query Conservation  
                           
Alig confidence  
Template Conservation  
                                           
Template Sequence  
F I D E I H R L S P A I E E V L Y P A X E D Y P K F T L I G
Template Known Secondary structure  
S G G G T
Template Predicted Secondary structure  
Template SS confidence  
   
108 . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]