Return to main results Retrieve Phyre Job Id

Job DescriptionP23331
Confidence96.58%DateThu Jan 5 11:39:23 GMT 2012
Rank326Aligned Residues85
% Identity14%Templatec3h1tA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:type i site-specific restriction-modification PDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. ........40.........50.........60.........70.....
Predicted Secondary structure 








.........













Query SS confidence 


























. . . . . . . . .











































Query Sequence  YFYYSAMNAGKSTALLQSSYNYQERGM. . . . . . . . . RTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAE
Query Conservation   

 
 






 
          
 ......... 
 

 
  
 
     
 
  
             
       
Alig confidence 


























.........










..






























Template Conservation   

   





     
   
              


 
 
   
..  
             
 
 


 
      
Template Sequence  SLITXATGTGKTVVAFQISWKLWSARWNRTGDYRKPRILFLADTFTP. . FGDARHKIEGVVKSREIYFAIYQSIPGLYKE
Template Known Secondary structure 
TTS
TT

SS
SSS





TT..T
SS




SS
SGGG


GGGG
Template Predicted Secondary structure 















..





Template SS confidence 















































































   201........210.........220.........230.........240....... ..250.........260.........270........
 
   76...80.........90.
Predicted Secondary structure 








Query SS confidence 















Query Sequence  HEQQAIHCVLVDECQF
Query Conservation        









Alig confidence 















Template Conservation        








 
Template Sequence  FPQDFFDLIIIDECHW
Template Known Secondary structure  S
TTS
SS



Template Predicted Secondary structure 






Template SS confidence 















   298.300.........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions