Job Description P23331 Confidence 100.00% Date Thu Jan 5 11:39:23 GMT 2012 Rank 2 Aligned Residues 169 % Identity 25% Template c3e2iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from s. aureus Resolution 2.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		G	W	I	E	C	I	T	G	S	X	F	S	G	K	S	E	E	L	I	R	R	L	R	R	G	I	Y	A	K	Q	K	V	V	V	F	K	P	.	.	.	.	.	.	.	.	.	.	.	A	S	H	N	G	N	A	I	E	A	I	N	I	S	K	A	S	E	I	X	T	.	.	.	.	.	H	D	L	T	N	V
Template Known Secondary structure											T	T	S																T	T									.	.	.	.	.	.	.	.	.	.	.			B	T	T	B								S	S	G	G	G	G	G	G	.	.	.	.	.	S			T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K	T	I	C	F	.	C	G	R	K	A	S	M	V	L	R	L	D	Q	A
Query Conservation																																																																			.
Alig confidence																											.																																								.
Template Conservation																											.
Template Sequence		D	V	I	G	I	D	E	V	Q	F	F	D	D	E	I	V	S	I	V	E	K	L	S	A	D	.	G	H	R	V	I	V	A	G	L	D	X	D	F	R	G	E	P	F	E	P	X	P	K	L	X	A	V	S	E	Q	V	T	K	L	Q	A	V	C	A	V	C	G	S	S	S	S	R	T	Q	R	L	I	N	G
Template Known Secondary structure		S							G	G	G	S		T												T	.	T									S	B		T	T	S		B		T	T									S										T	T	T		S										T	T
Template Predicted Secondary structure																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	Y	N	E	G	E	Q	V	V	I	G	G	N	E	R	Y	V	S	V	C	R	K	H	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	A	K	I	D	D	P	I	I	L	V	G	A	N	E	S	Y	E	P	R	C	R	A	H	H	I
Template Known Secondary structure					B	T	T			S			S	S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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