Job Description P23331 Confidence 95.61% Date Thu Jan 5 11:39:23 GMT 2012 Rank 401 Aligned Residues 94 % Identity 15% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I	H	C	V
Query Conservation
Alig confidence															.																																																					.	.	.	.	.	.	.
Template Conservation															.																																																					.	.	.	.	.	.	.
Template Sequence		V	L	I	T	G	E	S	G	T	G	K	E	I	.	V	A	R	L	I	H	R	Y	S	G	R	K	G	A	F	V	D	L	N	C	A	S	I	P	Q	E	L	A	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	L	T	R	K	K	G	K	L	E	.	.	.	.	.	.	.	L	A	D	Q	G	T	L
Template Known Secondary structure								T	T	S	S				.													S							S	S	S	S		T	T	T										S		S	S	S	S											.	.	.	.	.	.	.		T	T	T	S
Template Predicted Secondary structure															.																																																					.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	D	E	V	G	E	L	D	Q	R	V	Q	A	K	L	L	R	V	L	E	T
Template Known Secondary structure					T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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