Job Description P23331 Confidence 94.59% Date Thu Jan 5 11:39:23 GMT 2012 Rank 466 Aligned Residues 83 % Identity 25% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.																		.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	.	.	I	D	D	R	F	G	A	G	.	.	K	V	S	S	R	I	G	L	S	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	L	F	N	Q	N	S	S	L
Query Conservation																																.	.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	G	E	G	K	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	K	G	V	H	V	V	T	V	N	E	Y	L	A	S	R	D	A	E	Q	M	G	K	I	F	E	F	L	G	L	T	V	G	L	N	L	N	S	M	S	K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T	N	N	E	L
Template Known Secondary structure		S	S	S	S		T													T	T	S	S							S												T							T	T					B			S	S			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
			69	70	.	.	.								.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure		.						.	.	.	.	.	.	.
Query SS confidence		.						.	.	.	.	.	.	.
Query Sequence		.	F	D	E	I	R	.	.	.	.	.	.	.	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L
Query Conservation		.						.	.	.	.	.	.	.
Alig confidence		.						.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	D	Y	L	R	D	N	M	V	L	Y	K	E	Q	M	V	Q	R	P	L	H	F	A	V	I	D	E	V	D	S	I
Template Known Secondary structure								T	T	T		S		S															T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions