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Job DescriptionP23331
Confidence97.42%DateThu Jan 5 11:39:23 GMT 2012
Rank191Aligned Residues131
% Identity19%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50.........60.........70.........
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Query Sequence  AQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVV. . YTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQ
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Template Sequence  GQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD
Template Known Secondary structure  S
STTSSTTSS

STT
TT


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TTSBTT
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   31........40.........50.........60.........70.........80.........90.........100.........110
 
   80. ........ 90.... .....100.......
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Query Sequence  AI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HCVLVDEC. QFLTR. . . . QQVYELSEVVDQL
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Template Sequence  NTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRL
Template Known Secondary structure  T

TTSTTTTTSS
BS


T

SSGGGSS
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   111........120.........130.........140.........150.........160.........170.........180.........190
 
   108.110.........120.........130.........140..
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Query Sequence  DIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELK
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Template Sequence  GLTILLITHEMD. . . . . . . . . . VVKRICDCVAVIS
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BS
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   191........200.. .......210.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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