Job Description P23331 Confidence 96.78% Date Thu Jan 5 11:39:23 GMT 2012 Rank 300 Aligned Residues 92 % Identity 21% Template c3cmwA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																						.							.	.	.
Query SS confidence																																																						.							.	.	.
Query Sequence		M	A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	.	I	G	L	S	S	P	.	.	.	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H
Query Conservation																																																						.							.	.	.
Alig confidence																																					.	.	.	.														.							.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	.	.	.	.	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A
Template Known Secondary structure		T	T	S							S	T	T	S	S															T	T						.	.	.	.			T	T	S										T	T			G	G	G							S	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A
Template Known Secondary structure				T			S					S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions