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Job DescriptionP23331
Confidence97.67%DateThu Jan 5 11:39:23 GMT 2012
Rank140Aligned Residues112
% Identity8%Templatec3bosA_
PDB info PDB header:hydrolase regulator,dna binding proteinChain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  YFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCV
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Template Sequence  IYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHASISTA. . . . . . . . . . . . . . . . . . . . . . . . . . LLEGLEQFDLI
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STTSSTT

GGGGGGS
GG..........................GGTTGGGSS
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   54.....60.........70.........80.........90...... ...100.......
 
   85....90... ......100.........110.........120.........130.........140..
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Query Sequence  LVDECQFLT. . . . . . RQQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELK
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Template Sequence  CIDDVDAVAGHPLWEEAIFDLYNRVAEQKRGSLIVSASASPXEAGFVLPDLVSRXHWGLTYQLQ
Template Known Secondary structure  TGGGGTT

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   108.110.........120.........130.........140.........150.........160.........170.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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