Job Description P23331 Confidence 98.40% Date Thu Jan 5 11:39:23 GMT 2012 Rank 54 Aligned Residues 113 % Identity 12% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																	.																									.	.	.	.
Query SS confidence																	.																									.	.	.	.
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	.	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	.	.	.	.	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H
Query Conservation																	.																									.	.	.	.
Alig confidence																	.																									.	.	.	.																																	.
Template Conservation																																																																														.
Template Sequence		R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	.	M	S	P
Template Known Secondary structure		T									T	T	S		T	T	T	T												T	T									S											T	T	T	S										S														.		S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	.	.	.	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure							S					S	S	T	T			S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions