Job Description P23331 Confidence 95.59% Date Thu Jan 5 11:39:23 GMT 2012 Rank 402 Aligned Residues 104 % Identity 20% Template c2vedA_ PDB info PDB header:transferase Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein Resolution 2.6 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure												.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	.	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	S	I	V	I	T	S	E	A	P	G	A	G	M	S	T	I	A	A	N	L	A	V	A	Y	A	Q	A	G	Y	K	T	L	I	V	D	G	D	M	R	K	P	T	Q	H	Y	I	F	N	L	P	N	N	E	G	L	S	S	L	L	L	N	W	S	T	Y	Q	D	S	I	I	S	T	E	I	E	D	L	D
Template Known Secondary structure										S	S	T	T	S	S															T	T										S	S	S							T	T				S	S	S						T	T	S	S										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
									58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	T	S	G	P	I	P	P	N	P	S	E	L	I	T	S	R	A	F	A	N	L	Y	D	T	L	L	M	N	Y	N	F	V	I	I	D	T	P	P	V	N	T	V	T	D	A	Q	L	F	S	K	F	T	G
Template Known Secondary structure							S			S							T	S															S									T	T	T		T										S
Template Predicted Secondary structure
Template SS confidence
		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions