Job Description P23331 Confidence 98.81% Date Thu Jan 5 11:39:23 GMT 2012 Rank 20 Aligned Residues 113 % Identity 12% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	.	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	.	.	.	.	.	.	.	.	.	.	.	.	K	L	F	N	Q	N	S	S	L
Query Conservation																		.																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C	H	A	T	F
Template Known Secondary structure		T									T	T	T			T	T	T												T	T								S	S											T	T	T	S							T	T		S						S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		F	D	E	I	R	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	.	.	.	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M
Template Known Secondary structure									S						S						S	T	T			S																	T	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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