Job Description P23331 Confidence 100.00% Date Thu Jan 5 11:39:23 GMT 2012 Rank 5 Aligned Residues 167 % Identity 25% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		G	K	L	T	V	I	T	G	P	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	K	K	V	A	V	F	K	P	K	S	T	M	I	V	S	H	.	.	.	.	.	.	.	.	.	.	V	E	A	H	V	I	E	R	P	E	E	M	R	K	Y	I	.	.	.	.	.	E	E	D	T
Template Known Secondary structure										S	T	T	S	S															T	T												B					.	.	.	.	.	.	.	.	.	.		B					S	S	G	G	G	G	G	G	G		.	.	.	.	.		T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.											.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.		150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.				.
Query SS confidence																																																																			.				.
Query Sequence		H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K	T	I	C	F	.	C	G	R	.	K	A	S	M	V	L	R	L	D	Q
Query Conservation																																																																			.				.
Alig confidence																											.																																								.				.
Template Conservation																											.
Template Sequence		R	G	V	F	I	D	E	V	Q	F	F	N	P	S	L	F	E	V	V	K	D	L	L	D	R	.	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T	A	L	L	L	S	L	A	D	T	V	I	K	K	K	A	V	C	H	R	C	G	E	Y	N	A	T	L	T	L	K	V	A	G
Template Known Secondary structure									G	G	G	S		T	T											T	.	T									S	B		T	T	S		B												S							B			T	T	T			S		B							S	S
Template Predicted Secondary structure																											.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	P	Y	N	E	G	E	Q	V	V	I	G	G	N	E	R	Y	V	S	V	C	R	K	H	Y	K	E	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	E	E	E	I	D	V	G	G	Q	E	K	Y	I	A	V	C	R	D	C	Y	N	T	L	K
Template Known Secondary structure		.	.	.	.	.	.		S		S					S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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