Job Description P23331 Confidence 100.00% Date Thu Jan 5 11:39:23 GMT 2012 Rank 4 Aligned Residues 158 % Identity 28% Template c2orvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: human thymidine kinase 1 in complex with tp4a Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	I	Q	V	I	L	G	P	M	F	S	G	K	S	T	E	L	M	R	R	V	R	R	F	Q	I	A	Q	Y	K	C	L	V	I	K	Y	A	K	D	M	E	A	L	P	A	C	L	L	R	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	A	L	G	V
Template Known Secondary structure											T	T	S															T	T	T									T	T								S	S	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																						.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K	T	I	C	F	.	C	G	R	K	A	S	M	V	L	R	L	D	Q	A
Query Conservation																																																																			.
Alig confidence														.	.																																																				.														.
Template Conservation														.	.																																																																		.
Template Sequence		A	V	I	G	I	D	E	G	Q	F	F	P	.	.	D	I	V	E	F	C	E	A	M	A	N	A	G	K	T	V	I	V	A	A	L	D	G	T	F	Q	R	K	P	F	G	A	I	L	N	L	V	P	L	A	E	S	V	V	K	L	T	A	V	C	M	E	C	F	R	E	A	A	Y	T	K	R	L	G	T	.
Template Known Secondary structure		S					S	S	G	G	G		T	.	.	T											T	T									S	B		T	T	S	S	B		T	T	G	G	G	G	G	G	G		S										T	T	T	S	S									S	S	.
Template Predicted Secondary structure														.	.																																																																		.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	Y	N	E	G	E	Q	V	V	I	G	G	N	E	R	Y	V	S	V	C	R	K	H	Y	K	E
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	E	K	E	V	E	V	I	G	G	A	D	K	Y	H	S	V	C	R	L	C	Y	F	K
Template Known Secondary structure		.	.	.	.	.			S	S					S	T	T	T										T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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