Job Description P23331 Confidence 96.92% Date Thu Jan 5 11:39:23 GMT 2012 Rank 275 Aligned Residues 131 % Identity 16% Template c2olkD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																															.																											.	.	.	.	.	.	.	.
Query SS confidence																																															.																											.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	.	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	.	.	.	.	.	.	.	.
Query Conservation																																															.																											.	.	.	.	.	.	.	.
Alig confidence																																															.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	V	V	V	V	I	G	P	S	G	S	G	K	S	T	F	L	R	C	L	N	L	L	E	D	F	D	E	G	E	I	I	I	D	G	I	N	L	K	A	K	D	T	N	L	N	K	V	R	E	E	V	G	M	V	F	Q	R	F	N	L	F	P	H	M	T	V	L	N	N	I	T	L	A	P	M	K	V	R
Template Known Secondary structure		T								S	T	T	S	S									T	T	S	S			S							T	T			T	T	S	T	T															S	S			S		T	T	S													T	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
																																										73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																		.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																		.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	.	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	.	.	.	L	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																		.	.	.
Template Conservation
Template Sequence		K	W	P	R	E	K	A	E	A	K	A	M	E	L	L	D	K	V	G	L	K	D	K	A	H	A	Y	P	D	S	L	S	G	G	Q	A	Q	R	V	A	I	A	R	A	L	A	M	E	P	K	I	M	L	F	D	E	P	T	S	A	L	D	P	E	M	V	G	E	V	L	S	V	M	K	Q	L	A	N	E	G
Template Known Secondary structure																			T	T		G	G	G	T	T	S		G	G	G	S															T	T			S						S	S	S	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	M	V	V	V	T	H	E	M	G	.	.	.	.	.	.	.	.	.	.	F	A	R	E	V	G	D	R	V	L	F	M	D
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions