Job Description P23331 Confidence 97.15% Date Thu Jan 5 11:39:23 GMT 2012 Rank 236 Aligned Residues 143 % Identity 10% Template c2o8bA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair Resolution 2.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A	I
Query Conservation
Alig confidence																																												.											.	.	.	.	.	.	.
Template Conservation																																												.											.	.	.	.	.	.	.
Template Sequence		Q	M	F	H	I	I	T	G	P	N	M	G	G	K	S	T	Y	I	R	Q	T	G	V	I	V	L	M	A	Q	I	G	C	F	V	P	C	E	S	A	E	V	S	.	I	V	D	C	I	L	A	R	V	G	.	.	.	.	.	.	.	S	T	F	M	A	E	M	L	E	T	A	S	I	L	R	S	A	T	K	D
Template Known Secondary structure		S								S	T	T	S	S																	T	T			B	S	S	S						.			S								.	.	.	.	.	.	.															T	T			T	T
Template Predicted Secondary structure																																												.											.	.	.	.	.	.	.
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.		.	.	.	.	.	.	710	.	.	.								.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																																			.
Query SS confidence																.	.	.	.	.	.																																																			.
Query Sequence		H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	.	.	.	.	.	.	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K	T	I	C	.	F	C	G	R	K	A	S	M	V
Query Conservation																.	.	.	.	.	.																																																			.
Alig confidence																.	.	.	.	.	.																						.	.	.	.	.	.	.	.																						.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		S	L	I	I	I	D	E	L	G	R	G	T	S	T	Y	D	G	F	G	L	A	W	A	I	S	E	Y	I	A	T	K	I	G	A	F	C	M	F	A	T	H	.	.	.	.	.	.	.	.	F	H	E	L	T	A	L	A	N	Q	I	P	T	V	N	N	L	H	V	T	A	L	T	T	E	E	T	L	T	M	L
Template Known Secondary structure		S						S				S	S																			T	T										.	.	.	.	.	.	.	.		T	T	S	T	T					S	S	S												S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.									.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
		155	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	D	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	V	K	K	G
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		815	.	.	.	.	820

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions