Job Description P23331 Confidence 97.44% Date Thu Jan 5 11:39:23 GMT 2012 Rank 188 Aligned Residues 98 % Identity 16% Template c2f55C_ PDB info PDB header:hydrolase/dna Chain: C: PDB Molecule:polyprotein; PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna Resolution 3.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																									.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	.	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	.	.	.	.	.	.	.	.	.	.	P	A	K	L	F	N	Q	N	S	S	L	F	D	E
Query Conservation																																									.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		Q	V	A	H	L	H	A	P	T	G	S	G	K	S	T	K	V	P	A	A	Y	.	.	.	A	A	Q	G	Y	K	V	L	V	L	N	P	S	V	A	A	T	L	G	F	G	A	Y	M	S	K	A	H	G	I	D	P	N	I	R	T	G	V	R	T	I	T	T	G	G	S	I	T	Y	S	T	Y	G	K	F	L
Template Known Secondary structure		B								S	S	S	S	T	T	T	T	S					.	.	.		T	T	S								S		S														S	S								S	S								S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	G	C	S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	D	S	T	T	I	L	G	I	G	T	V
Template Known Secondary structure			T	T	S	S	S	T	T			S					T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions