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Job DescriptionP23331
Confidence97.44%DateThu Jan 5 11:39:23 GMT 2012
Rank184Aligned Residues131
% Identity15%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30......
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Query Sequence  AQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVFVPPKERDVAXVFQSYALYPHXTVYDNIAFPLKL
Template Known Secondary structure  T

STTSSTSS

STTGGGT

T


S



TTS
T
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   37..40.........50.........60.... .....70.........80........ .90... ......100......
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Query Sequence  . . TAEIDDRFGAGKVSSRIGLSSPAKLFNQ. . . NSSLFDEIRAEHEQQAIHCVLVDE. CQFLT. . . . RQQVYELSEVVDQ
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Template Sequence  RKVPKQEIDKRVREVAEXLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQ
Template Known Secondary structure  TT

TT
GGGTT

GGGS
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SSTTTT

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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   107..110.........120.........130.........140..
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Query Sequence  LDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELK
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Template Sequence  LGVTTIYVTHDQV. . . . . . . . . . EAXTXGDRIAVXN
Template Known Secondary structure  T
S
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   192.......200.... .....210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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