Job Description P23331 Confidence 100.00% Date Thu Jan 5 11:39:23 GMT 2012 Rank 7 Aligned Residues 160 % Identity 23% Template c1xx6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26. Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	S	S	P	A	K	L	F	N	Q	N	S	S	L	F	D	E	I	R	A	E	H	E	Q	Q	A
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	W	V	E	V	I	V	G	P	X	Y	S	G	K	S	E	E	L	I	R	R	I	R	R	A	K	I	A	K	Q	K	I	Q	V	F	K	P	E	A	V	A	I	K	N	S	R	E	I	L	K	Y	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D
Template Known Secondary structure											S	T	T	S	S															T	T														S	S	S	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																									.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	D	K	L	V	E	L	K	T	I	C	F	.	C	G	R	K	A	S	M	V	L	R	L	D	Q
Query Conservation																																																																				.
Alig confidence																												.																																								.
Template Conservation																												.
Template Sequence		T	E	V	I	A	I	D	E	V	Q	F	F	D	D	E	I	V	E	I	V	N	K	I	A	E	S	.	G	R	R	V	I	C	A	G	L	D	X	D	F	R	G	K	P	F	G	P	I	P	E	L	X	A	I	A	E	F	V	D	K	I	Q	A	I	C	V	V	C	G	N	P	A	T	R	T	Q	R	L	I	N
Template Known Secondary structure			S						S	G	G	G	S		T												T	.	T									S	B		T	T	S		B		T	T									S										T	T	T	S	S										T
Template Predicted Secondary structure																												.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	P	Y	N	E	G	E	Q	V	V	I	G	G	N	E	R	Y	V	S	V	C	R	K	H	Y	K	E	A	L
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		G	K	.	.	.	.	.	P	A	F	Y	D	D	P	V	X	E	S	Y	E	A	R	C	R	K	C	H	V	V	P	Q
Template Known Secondary structure		T		.	.	.	.	.				T	T												T	T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		161	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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