 |
Job Description | P23331 | Confidence | 95.92% | Date | Thu Jan 5 11:39:23 GMT 2012 |
Rank | 386 | Aligned Residues | 86 |
% Identity | 10% | Template | c1ueiB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:uridine-cytidine kinase 2; |
PDBTitle: crystal structure of human uridine-cytidine kinase 22 complexed with a feedback-inhibitor, utp
|
Resolution | 2.60 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | F | Y | Y | S | A | M | N | A | G | K | S | T | A | L | L | Q | S | S | Y | N | Y | Q | E | R | G | M | R | T | V | V | Y | T | A | . |
. |
. |
. |
E | I | D | D | R | F | G | A | G | K | V | S | S | R | I | G | L | S | S | P | A | K | L | F | N | Q | N | S | S | L | F | D | E | I | R | A | E | H | E | Q | Q |
Query Conservation |   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
| . | . | . | . |   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
L | I | G | V | S | G | G | T | A | S | G | K | S | S | V | C | A | K | I | V | Q | L | L | G | Q | Y | R | Q | K | Q | V | V | I | L | S | Q | D | S | F | Y | R | V | L | T | S | E | Q | K | A | K | A | L | K | G | Q | F | N | F | D | H | P | D | A | F | D | N | E | L | I | L | K | T | L | K | E | I | T | E | G | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
|  |  |  |  |  | G | G | G | G | B |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
| S |
| T | T | S | G | G | G | B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | H | C | V | L | V | D | E | C |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | V | Q | I | P | V | Y | D | F | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|