Job Description P23331 Confidence 93.75% Date Thu Jan 5 11:39:23 GMT 2012 Rank 491 Aligned Residues 135 % Identity 16% Template c1kmhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atpase alpha subunit; PDBTitle: crystal structure of spinach chloroplast f1-atpase2 complexed with tentoxin Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	L	Y	F	Y	Y	S	A	M	N	A	G	K	S	T	A	L	L	Q	S	S	Y	N	Y	Q	E	R	G	M	R	T	V	V	Y	T	A	E	I	D	D	R	F	G	A	G	K	V	S	S	R	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	P	A	K	L	F	N	Q	N	S	S
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	V	A	T	D	T	I	L	N	Q	Q	G	Q	N	V	I	C	V	Y	V	A	I	G	Q	K	A	S	S	V	A	Q	V	V	T	N	F	Q	E	R	G	A	M	E	Y	T	I	V	V	A	E	T	A	D	S	P	A	T	L	Q	Y	L	A	P	Y	T
Template Known Secondary structure		T				B					T	T	S	S											T			T	T	T									S												T	T	T	T	T	T	G	G	G	S								S	S	S		S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	F	D	E	I	R	A	E	H	E	Q	Q	A	I	H	C	V	L	V	D	E	C	Q	F	L	T	R	Q	Q	V	Y	E	L	S	E	V	V	D	Q	L	D	I	P	V	L	C	Y	G	L	R	T	D	F	R	G	E	L	F	I	G	S	Q	Y	L	L	A	W	S	.	.	.	.	.	.	.	.	.	D	K	L
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.																				.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																				.	.	.	.
Template Sequence		G	A	A	L	A	E	Y	F	M	Y	R	E	R	H	T	L	I	I	Y	D	D	L	S	K	Q	.	.	.	.	A	Q	A	Y	R	Q	M	S	L	L	L	R	R	P	P	G	R	E	A	.	.	.	.	Y	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	K	L	S	S	L	L	G	E	G	S	M
Template Known Secondary structure											T	T	T										S				.	.	.	.											T	T					G	G	G	.	.	.	.			S		S	S	T	T					T	T	S		S	B	B		T	T	T	T	S
Template Predicted Secondary structure																											.	.	.	.																				.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		139	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	K	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	L	P	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions