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Job DescriptionP23331
Confidence97.55%DateThu Jan 5 11:39:23 GMT 2012
Rank165Aligned Residues106
% Identity14%Templatec1iqpF_
PDB info PDB header:replicationChain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  YFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCV
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Template Sequence  LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKP. . . . . . . . . . . . . . IGGASFKII
Template Known Secondary structure  S
TTSSTTGGGTTTSS
TTS

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S
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   4950.........60.........70.........80.........90.........100..... ....110....
 
   85....90.........100.........110.........120....
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Query Sequence  LVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDFRGEL
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Template Sequence  FLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKII
Template Known Secondary structure  TGGGS
TTTTS
GGGS
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   115....120.........130.........140.........150....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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