 |
Job Description | P37649 | Confidence | 87.96% | Date | Thu Jan 5 11:56:21 GMT 2012 |
Rank | 103 | Aligned Residues | 77 |
% Identity | 14% | Template | d1lwha2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.60 |
|
 |
  |   |
531 | . | . | . | . | . | . | . | . | 540 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | L | E | V | T | E | S | R | R | I | D | . |
. |
. |
. |
. |
. |
. |
D | P | H | A | A | V | A | I | L | R | P | L | R | N | A | G | V | R | V | A | L | . |
. |
. |
. |
. |
. |
D | D | F | G | M | G | Y | A | G | L | R | Q | L | Q | H | M | K | S | L | P | I | D | V | L | K | I | D | K | M | F | V | E | G | L |
Query Conservation |   |
|   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . |
|   |
|
|   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . |
Template Sequence |   |
I | G | Y | Q | I | Y | V | R | S | F | R | D | G | N | L | D | G | V | G | D | F | R | G | L | K | N | A | V | S | Y | L | K | E | L | G | I | D | F | V | W | L | M | P | V | F | S | S | I | S | F | H | G | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | D | F | Y | S | F | K | A | E | Y | . |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |
| G | G | G | T |
|
| S | S | S | S | S | S |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|  |  |
| S | S | S | S |
|
| S | . | . | . | . | . | . | . | . | . | . | . |
| S |  |  |  |  |  |
| G | G | G | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
  |
  |   |
598 | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | D | S | S | M | I | A | A | I | I | M | L | A | Q | S | L | N | L | Q | M | I | A | E | G | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
. |
G | S | E | R | E | F | K | E | M | I | E | A | F | H | D | S | G | I | K | V | V | L | D | L | P |
Template Known Secondary structure |   |
. |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|