Return to main results Retrieve Phyre Job Id

Job DescriptionP37649
Confidence44.66%DateThu Jan 5 11:56:21 GMT 2012
Rank323Aligned Residues105
% Identity11%Templated1ccwa_
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   547..550.........560.........570.........580.........590.........600.........610..... ....620..
Predicted Secondary structure 





















...

.
Query SS confidence 




































































. . .






.
Query Sequence  AVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLN. . . LQMIAEG.
Query Conservation         
   
  
 

 

 
 
   

  
  
  
 



                
   
    ...
 


 
.
Alig confidence 














..




























....


















...






.
Template Conservation     
   
   
  
..  

     
           
 
 

  ....          

  

        
 


 
Template Sequence  NKILDHAFTNAGFNV. . VNIGVLSPQELFIKAAIETKADAILVSSL. . . . YGQGEIDCKGLRQKCDEAGLEGILLYVGGN
Template Known Secondary structure  TT
..
T
S
....SSTTTTT
TT
S
Template Predicted Secondary structure 


..











....











Template SS confidence 















































































   20.........30.... .....40.........50.........60... ......70.........80.........90...
 
   623......630.........640.........650.........660.
Predicted Secondary structure  .....















Query SS confidence  . . . . .






































Query Sequence  . . . . . VETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEE
Query Conservation  .....

       
   
 
  

     
             
Alig confidence  .....

















....
















Template Conservation                
   
 
 
....
  
   
     

  
Template Sequence  IVVGKQHWPDVEKRFKDMGYDRV. . . . YAPGTPPEVGIADLKKD
Template Known Secondary structure 
SSSS

TT
S....

TT

Template Predicted Secondary structure 










....





Template SS confidence 











































   94.....100.........110...... ...120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions