Job Description P37649 Confidence 30.83% Date Thu Jan 5 11:56:21 GMT 2012 Rank 362 Aligned Residues 104 % Identity 13% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	P	H	A	A	V	A	I	L	R	P	L	R	N	A	G	V	R	V	A	L	D	D	F	G	M	G	Y	A	G	L	R	Q	L	Q	H	M	K	S	L	P	I	D	V	L	K	I	D	K	M	F	V	E	G	L	P	G	D	S	S	M	I	A	A	I	I	M	L	A	Q	S	L	N	L	Q	M	I	A	E
Query Conservation
Alig confidence																								.	.							.	.	.																	.	.	.		.
Template Conservation																								.	.							.	.	.																	.	.	.		.
Template Sequence		D	E	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	.	.	A	T	N	G	A	Q	.	.	.	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	D	.	.	.	V	.	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	L	F	L	T
Template Known Secondary structure		S															T	T						.	.		S	S				.	.	.											S						.	.	.		.			S	S												T	T
Template Predicted Secondary structure																								.	.							.	.	.																	.	.	.		.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	E	A	Q	R	D	W	L	A	K	A	G	V	G	I	A	Q	G	F	L	F	A	R	P	L	P	I	E	I	F	E	E	S	Y
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		A	R	D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	.	.	.	.	V	T	K	P	F	S	L	E	E	V	V	A	R	L
Template Known Secondary structure			S	T	T									T	S	T	T				.	.	.	.			S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions